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SRX24949879: Fulvia fulva isolate Race 5 Kim-Solanum lycopersicum cv. MoneyMaker interaction 12 dpi replicate 1
1 ILLUMINA (Illumina NovaSeq 6000) run: 83.4M spots, 25.2G bases, 7.5Gb downloads

Design: Cladosporium fulvum isolate Race 5 Kim was grown in half-strength potato dextrose agar for 2 weeks at 23C. Tomato plants (Solanum lycopersicum cv. Moneymaker) were performed by conidia spray-inoculations as previously described and infected leaves were harvested at 12 dpi. Collected samples were immediately frozen in liquid nitrogen and stored at -80C until RNA extraction. Samples were ground to a powder in liquid nitrogen, and total RNA was extracted using Trizol. Preparation and sequencing of the polyA-selected RNAseq libraries were outsourced to the DNA Technologies and Expression Analysis Core Laboratory at the UC Davis Genome Center.
Submitted by: University of California
Study: Fulvia fulva isolates Race 5 and Race 4 transcriptomes during host interaction
PRJNA1118412 • SRP514138 • All experiments • All runs
show Abstracthide Abstract
Time course transcriptomes of Fulvia fulva isolates Race 5 Kim and Race 4 during interaction with Solanum lycopersicum cv. Moneymaker.
Sample: Compatible Fulvia fulva isolate Race 5 Kim-Solanum lycopersicum cv. MoneyMaker interaction at 12 days post-inoculation
SAMN41609004 • SRS21653598 • All experiments • All runs
Organism: Fulvia fulva
Library:
Name: CFR5_MM_dpi12_1
Instrument: Illumina NovaSeq 6000
Strategy: RNA-Seq
Source: TRANSCRIPTOMIC
Selection: cDNA
Layout: PAIRED
Runs: 1 run, 83.4M spots, 25.2G bases, 7.5Gb
Run# of Spots# of BasesSizePublished
SRR2943723883,357,17325.2G7.5Gb2024-06-17

ID:
33286122

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